Denpasar, Indonesia
Backpacking GuidesDestination Guide🌏 Yogyakarta

Backpacking Indonesia: Island Hopping Without Losing Weeks to Ferries

Indonesia is 17,000 islands across three time zones, and the difference between a good trip and a bad one is how many boat days you accidentally book.

Backpacker Editorial

August 15, 2026 · 4 min read

Key takeaways

  • Indonesia is bigger than most people picture — 17,000 islands spread across a distance equivalent to London to Tehran.
  • Bali → Labuan Bajo: 1h20 — 2–3 days.
  • Bali → Sumatra: 2–3h — Multiple days.

Indonesia is bigger than most people picture — 17,000 islands spread across a distance equivalent to London to Tehran. The single decision that determines whether a trip works is when to fly and when to take a boat, because the ferry network is slow and the country is wide.

The route that works in Yogyakarta

The route that works

Java — volcanoes and culture. Yogyakarta as the base: Borobudur and Prambanan temples at dawn, the sultan's palace, and batik workshops. Then east to Mount Bromo for the sunrise over the caldera, and Ijen for the blue sulphur flames and the turquoise crater lake. Ijen means a 1am start and the sulphur is genuinely unpleasant to breathe — bring a proper mask, not the cloth one they hand out.

Bali — not the party island of its reputation unless you go looking. Ubud for rice terraces and the interior, Amed or Pemuteran for quiet diving, Bukit for surf. Two to five days is plenty for most backpackers; Bali is where people either stay a month or leave in three days.

Lombok and the Gilis — a short ferry east. Gili Trawangan is the busy one, Gili Air is the balance, Gili Meno is nearly empty. No motorised transport on any of them. Lombok itself has Mount Rinjani, a serious two-to-three-day trek.

Flores and Komodo — fly to Labuan Bajo. The two or three-day boat trip through Komodo National Park is the highlight of most Indonesia trips: dragons, Padar island's viewpoint, and manta rays at Manta Point. Book from Labuan Bajo rather than online, where the same trip costs double.

Fly, do not sail in Yogyakarta

Fly, do not sail

LegFlightFerry/land
Jakarta → Yogyakarta1h8h train (train is fine)
Yogyakarta → Bali1h20~18h bus + ferry
Bali → Lombok30 min4–5h fast boat
Bali → Labuan Bajo1h202–3 days
Bali → Sumatra2–3hMultiple days

Domestic flights on Lion Air, Citilink and Garuda routinely cost $40–70. That is the best money you will spend in Indonesia. Java's trains, by contrast, are genuinely good and worth using within the island — the Yogyakarta to Surabaya line is comfortable and cheap.

One caution: Indonesian domestic airlines have a mixed safety record historically and schedule changes are common. Build a buffer day before any international flight home.

Costs in Yogyakarta

Costs

ItemCost
Private room / homestayIDR 150–350k
Hostel dormIDR 90–180k
Warung mealIDR 20–45k
Scooter rental, per dayIDR 60–100k
Komodo boat, 2 nightsIDR 1.5–3.5m

Homestays are the accommodation to look for — family-run private rooms that cost about what a dorm does and are far more pleasant. Eat at warungs, the small family kitchens, where nasi goreng or gado-gado costs two dollars.

Practical warnings

Scooters. Everyone rents one and the accident rate among visitors is high. Most travel insurance excludes motorbike accidents without a licence valid for the engine size at home. Bali's traffic in particular is not a place to learn.

Volcano treks start absurdly early — Bromo at 3am, Ijen at 1am — and are cold at altitude even on the equator. Bring a fleece.

Ramadan affects Java and Lombok substantially, with many restaurants closed during daylight. Bali is Hindu and largely unaffected. Nyepi, the Balinese day of silence in March, closes the entire island including the airport for 24 hours — worth checking before booking.

When to go

April to October is the dry season across most of the country and the right window. November to March is the wet season, with heavy afternoon rain, rougher seas and more cancelled boat trips — the Komodo crossings in particular get called off.

July and August are peak and Bali fills. May, June and September are the sweet spot.

Frequently asked questions

How much does backpacking Indonesia cost per day?

Around $30 to $40 a day for a private room, local food and transport. Indonesia is cheaper than Thailand for accommodation and food but more expensive for movement, because internal flights and boat trips add up quickly. Budget separately for the Komodo boat trip and any diving, which are the two costs that break a plan.

Do I need a visa for Indonesia?

Most Western passports get a visa on arrival for 30 days, extendable once for another 30, purchased at the airport for around $35. There is also an e-VOA available online in advance. Check that your passport has six months validity, and note that the extension has to be done at an immigration office, which takes a couple of visits.

Should I fly or take ferries between Indonesian islands?

Fly for anything beyond neighbouring islands. Domestic flights on Lion Air, Citilink and Garuda are cheap, and a two-hour flight replaces a 24-hour ferry plus an overnight. Ferries make sense only for short hops such as Bali to Lombok or Lombok to the Gilis. Backpackers who commit to overland travel across Indonesia spend most of their trip in transit.

What is the best route for a first trip to Indonesia?

Java for volcanoes and culture, then Bali, then east to Lombok and the Gilis, finishing with a Komodo boat trip from Labuan Bajo in Flores. Three to four weeks covers it. Sumatra for orangutans and Sulawesi for diving are excellent but are separate trips rather than additions.

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